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Pacific Symposium on Biocomputing '97
註釋SESSION INTRODUCTIONS: Distributed and Intelligent Databases -- Modern Concepts in Molecular Modeling -- Extracting Biological Knowledge from DNA Sequences -- Understanding and Predicting Protein Structure -- Biopolymer Structures: Where Do They Come From? Where Are They Going? Evolutionary Perspectives on Biopolymer Structure and Function -- Computing with Biomolecules -- Computation in Biological Pathways -- REVIEWS: New Challenges in Computational Biochemistry -- FULL PAPERS (PEER REVIEWED): Computer Simulations of Prebiotic Evolution -- Ubiquitous Distributed Objects with CORBA --Towards a Density Functional Treatment of Chemical Reactions in Complex Media -- Combinatorial Tools for the Analysis of Transcriptional Regulation -- The Generalization Method of Relationships Among Nucleotide Sequences Reveals an Order in Assimilation of Amino Acid Codons During the Isoacceptor tRNAs Evolution -- Using Tcl for Molecular Visualization and Analysis -- On Some Operations Suggested by Genome Evolution -- The Inverse Protein Folding Problem: Self Consistent Mean Field Optimisation of a Structure Specific Mutation Matrix -- Theoretical and Algorithmical Optimization of the Dead-End Elimination Theorem -- Using Views for Retrieving Data from Extremely Heterogeneous Databanks -- Length Scales of Lipid Dynamics and Molecular Dynamics -- Specific Modelling of Regulatory Units in DNA Sequences -- Test Tube Systems with Cutting/Recombination Operations -- Organizing and Computing Metabolic Pathway Data in Terms of Binary Relations -- Development of a Cell Signaling Networks Database -- The Native Sequence Determines Sidechain Packing in a Protein, But Does Optimal Sidechain Packing Determine the Native Sequence? -- Design of Hydrophobic Core of E. Coli Malate Dehydrogenase Based on the Side-Chain Packing -- Latent Periodicity of DNA Sequences of Many Genes -- Integrating Database Homology in a Probabilistic Gene Structure Model -- Packing as a Structural Basis of Protein Stability: Understanding Mutant Properties from Wildtype Structure -- Facilities for Exploring Molecular Biology Databases on the Web: A Comparative Study -- Towards a Bacteriorhodopsin-Silicon Neuromorphic Photosensor -- An Approach to Detection of Protein Structural Motifs Using an Encoding Scheme of Backbone Conformations -- An Algorithm to Assemble Pathways from Processes -- Toward a Virtual-Labo-System for Metabolic Engineering: Development of Biochemical Engineering System Analyzing Tool-Kit (BEST-KIT) -- Method for Low Resolution Prediction of Small Protein Tertiary Structure --Multiple Model Approach--Dealing with Alignment Ambiguities in Protein Modeling --Search for DNA Conformational Features for Functional Sites. Investigation of the TATA Box -- Algorithmic Complexity of Growth Hormone Release in Humans -- Exploring the Fitness Landscapes of Lattice Proteins -- Accurate Mean-Force Pairwise-Residue Potentials for Discrimination of Protein Folds -- Real Time Surface Reconstruction for Moving Molecular Fragments -- Finding Association Rules on Heterogeneous Genome Data -- Enumerating Suboptimal Alignments of Multiple Biological Sequences Efficiently -- Redox Properties of Cytochrome C: Novel Linear Response and Hybrid Continuum-Microscopic Methodologies -- Protein Superfamily Members as Targets for Computer Modeling: The Carbohydrate Recognition Domain of a Macrophage Lectin -- Definite-Clause Grammars for the Analysis of CIS-Regulatory Regions in E. Coli -- Enumeration of Flux Routes Through Complex Biochemical Reactions -- Using the Radial Distribution of Physical Features to Compare Amino Acid Environments and Align Amino Acid Sequences -- Transfac Database as a Bridge Between Sequence Data Libraries and Biological Function -- A New Approach to Protein Fold Recognition Based on Delaunay Tessellation of Protein Structure.