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Identification of Novel Antiviral Drug Candidates Using an Optimized SARS-CoV-2 Phenotypic Screening Platform
Denisa Bojkova
Philipp Reus
Leona Panosch
Marco Bechtel
Tamara Rothenburger
Joshua D. Kandler
Annika Pfeiffer
Julian Uwe Gabriel Wagner
Mariana Shumliakivska
Stefanie Dimmeler
Ruth Maria Olmer
Ulrich Martin
Florian Vondran
Tuna Toptan
Florian Rothweiler
Richard Zehner
Holger Rabenau
Karen L. Osman
Steven T. Pullan
Miles Carroll
Richard Stack
Sandra Ciesek
Mark N. Wass
Martin Michaelis
Jindrich Cinatl
出版
Elsevier
, 2022
URL
http://books.google.com.hk/books?id=qk0j0AEACAAJ&hl=&source=gbs_api
註釋
Reliable, easy-to-handle phenotypic screening platforms are needed for the identification of anti-SARS-CoV-2 compounds. Here, we present caspase 3/7 activity as a readout for monitoring the replication of SARS-CoV-2 isolates from different variants, including a remdesivir-resistant strain, and of other coronaviruses in numerous cell culture models, independently of cytopathogenic effect formation. Compared to other models, the Caco-2 subline Caco-2-F03 displayed superior performance. It possesses a stable SARS-CoV-2 susceptibility phenotype and does not produce false-positive hits due to drug-induced phospholipidosis. A proof-of-concept screen of 1,796 kinase inhibitors identified known and novel antiviral drug candidates including inhibitors of phosphoglycerate dehydrogenase (PHGDH), CDC like kinase 1 (CLK-1), and colony stimulating factor 1 receptor (CSF1R). The activity of the PHGDH inhibitor NCT-503 was further increased in combination with the hexokinase II (HK2) inhibitor 2-deoxy-D-glucose, which is in clinical development for COVID-19. In conclusion, caspase 3/7 activity detection in SARS-CoV-2-infected Caco-2-F03 cells provides a simple phenotypic high-throughput screening platform for SARS-CoV-2 drug candidates that reduces false-positive hits.